Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHMP24386 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP24386 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP24386 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP24386 KRT8P17-201ENST00000453110 1448 ntBASIC18.06■□□□□ 0.48
CHMP24386 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP24386 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP24386 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHMP24386 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP24386 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
CHMP24386 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP24386 AC069544.1-201ENST00000609399 999 ntBASIC18.06■□□□□ 0.48
CHMP24386 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CHMP24386 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP24386 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP24386 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP24386 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 AC120498.9-201ENST00000339021 3867 ntBASIC18.05■□□□□ 0.48
CHMP24386 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHMP24386 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMP24386 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHMP24386 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP24386 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP24386 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP24386 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP24386 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP24386 AP006294.2-201ENST00000641667 209 ntBASIC18.05■□□□□ 0.48
CHMP24386 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMP24386 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP24386 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CHMP24386 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP24386 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP24386 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP24386 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP24386 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP24386 GCSHP5-201ENST00000443090 522 ntBASIC18.04■□□□□ 0.48
CHMP24386 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP24386 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP24386 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHMP24386 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHMP24386 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHMP24386 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP24386 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP24386 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP24386 LINC01465-201ENST00000408887 1940 ntBASIC18.04■□□□□ 0.48
CHMP24386 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP24386 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP24386 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms