Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.06■□□□□ 0.8
CD48P09326 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 AC141586.3-201ENST00000562166 1838 ntBASIC20.06■□□□□ 0.8
CD48P09326 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.06■□□□□ 0.8
CD48P09326 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CD48P09326 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.05■□□□□ 0.8
CD48P09326 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CD48P09326 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CD48P09326 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 AC004408.2-201ENST00000623613 2777 ntBASIC20.05■□□□□ 0.8
CD48P09326 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.05■□□□□ 0.8
CD48P09326 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.05■□□□□ 0.8
CD48P09326 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.05■□□□□ 0.8
CD48P09326 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.05■□□□□ 0.8
CD48P09326 AC073648.6-201ENST00000641589 218 ntBASIC20.05■□□□□ 0.8
CD48P09326 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CD48P09326 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD48P09326 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CD48P09326 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CD48P09326 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 AC006058.3-201ENST00000606217 1069 ntBASIC20.04■□□□□ 0.8
CD48P09326 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 AL020996.1-203ENST00000536896 2307 ntBASIC20.04■□□□□ 0.8
CD48P09326 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CD48P09326 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD48P09326 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
CD48P09326 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.03■□□□□ 0.8
CD48P09326 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 KRASP1-201ENST00000407852 552 ntBASIC20.03■□□□□ 0.8
CD48P09326 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.03■□□□□ 0.8
CD48P09326 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CD48P09326 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.03■□□□□ 0.8
CD48P09326 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CD48P09326 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.03■□□□□ 0.8
CD48P09326 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD48P09326 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CD48P09326 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CD48P09326 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.02■□□□□ 0.8
CD48P09326 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.02■□□□□ 0.8
CD48P09326 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms