Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.35■□□□□ 0.85
ERBB2P04626 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.35■□□□□ 0.85
ERBB2P04626 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.35■□□□□ 0.85
ERBB2P04626 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.35■□□□□ 0.85
ERBB2P04626 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.35■□□□□ 0.85
ERBB2P04626 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.35■□□□□ 0.85
ERBB2P04626 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERBB2P04626 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ERBB2P04626 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.34■□□□□ 0.85
ERBB2P04626 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ERBB2P04626 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.34■□□□□ 0.85
ERBB2P04626 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ERBB2P04626 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.34■□□□□ 0.85
ERBB2P04626 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.34■□□□□ 0.85
ERBB2P04626 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.34■□□□□ 0.85
ERBB2P04626 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.34■□□□□ 0.85
ERBB2P04626 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.34■□□□□ 0.85
ERBB2P04626 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ERBB2P04626 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERBB2P04626 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ERBB2P04626 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ERBB2P04626 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.33■□□□□ 0.85
ERBB2P04626 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ERBB2P04626 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.33■□□□□ 0.85
ERBB2P04626 NIFKP9-201ENST00000419265 221 ntBASIC20.33■□□□□ 0.85
ERBB2P04626 RPS2P4-201ENST00000476944 856 ntBASIC20.33■□□□□ 0.85
ERBB2P04626 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERBB2P04626 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.33■□□□□ 0.85
ERBB2P04626 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.33■□□□□ 0.85
ERBB2P04626 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 RARRES2P10-201ENST00000564312 460 ntBASIC20.33■□□□□ 0.85
ERBB2P04626 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ERBB2P04626 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ERBB2P04626 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ERBB2P04626 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.33■□□□□ 0.84
ERBB2P04626 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERBB2P04626 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.33■□□□□ 0.84
ERBB2P04626 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERBB2P04626 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.33■□□□□ 0.84
ERBB2P04626 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERBB2P04626 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.32■□□□□ 0.84
ERBB2P04626 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.32■□□□□ 0.84
ERBB2P04626 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ERBB2P04626 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ERBB2P04626 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 AL160286.2-201ENST00000567150 934 ntBASIC20.32■□□□□ 0.84
ERBB2P04626 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.32■□□□□ 0.84
ERBB2P04626 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.32■□□□□ 0.84
ERBB2P04626 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.32■□□□□ 0.84
ERBB2P04626 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERBB2P04626 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ERBB2P04626 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERBB2P04626 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERBB2P04626 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERBB2P04626 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERBB2P04626 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.31■□□□□ 0.84
ERBB2P04626 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
ERBB2P04626 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERBB2P04626 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.31■□□□□ 0.84
ERBB2P04626 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERBB2P04626 AP002982.1-201ENST00000492365 877 ntBASIC20.31■□□□□ 0.84
ERBB2P04626 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms