Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 AK4P3-201ENST00000418260 669 ntBASIC18.06■□□□□ 0.48
PDGFAP04085 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 AC022616.7-201ENST00000525383 220 ntBASIC18.06■□□□□ 0.48
PDGFAP04085 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PDGFAP04085 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFAP04085 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFAP04085 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFAP04085 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PDGFAP04085 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDGFAP04085 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.05■□□□□ 0.48
PDGFAP04085 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDGFAP04085 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDGFAP04085 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
PDGFAP04085 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.05■□□□□ 0.48
PDGFAP04085 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFAP04085 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.05■□□□□ 0.48
PDGFAP04085 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFAP04085 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 AL358472.4-201ENST00000633140 710 ntBASIC18.05■□□□□ 0.48
PDGFAP04085 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.05■□□□□ 0.48
PDGFAP04085 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDGFAP04085 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.05■□□□□ 0.48
PDGFAP04085 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFAP04085 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PDGFAP04085 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 TFP1-202ENST00000475455 1573 ntBASIC18.04■□□□□ 0.48
PDGFAP04085 AC116351.2-201ENST00000606540 1585 ntBASIC18.04■□□□□ 0.48
PDGFAP04085 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PDGFAP04085 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PDGFAP04085 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFAP04085 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 AC117947.1-201ENST00000427448 529 ntBASIC18.04■□□□□ 0.48
PDGFAP04085 BX664615.1-201ENST00000443558 458 ntBASIC18.04■□□□□ 0.48
PDGFAP04085 AC008040.2-201ENST00000461049 708 ntBASIC18.04■□□□□ 0.48
PDGFAP04085 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFAP04085 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFAP04085 AC063952.2-201ENST00000498792 1227 ntBASIC18.04■□□□□ 0.48
PDGFAP04085 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFAP04085 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFAP04085 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFAP04085 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFAP04085 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDGFAP04085 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDGFAP04085 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PDGFAP04085 UPK3BP1-201ENST00000428678 509 ntBASIC18.03■□□□□ 0.48
PDGFAP04085 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFAP04085 KRT18P16-201ENST00000510337 1294 ntBASIC18.03■□□□□ 0.48
PDGFAP04085 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.03■□□□□ 0.48
PDGFAP04085 SLC25A1P4-201ENST00000567977 778 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms