Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MT-ND1P03886 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-ND1P03886 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MT-ND1P03886 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.23■□□□□ 0.51
MT-ND1P03886 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.23■□□□□ 0.51
MT-ND1P03886 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.23■□□□□ 0.51
MT-ND1P03886 AC011767.1-201ENST00000617410 1153 ntBASIC18.23■□□□□ 0.51
MT-ND1P03886 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-ND1P03886 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MT-ND1P03886 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 WIZP1-201ENST00000531444 2299 ntBASIC18.23■□□□□ 0.51
MT-ND1P03886 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND1P03886 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.22■□□□□ 0.51
MT-ND1P03886 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MT-ND1P03886 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
MT-ND1P03886 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.22■□□□□ 0.51
MT-ND1P03886 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND1P03886 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.22■□□□□ 0.51
MT-ND1P03886 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND1P03886 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND1P03886 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
MT-ND1P03886 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
MT-ND1P03886 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND1P03886 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-ND1P03886 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-ND1P03886 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
MT-ND1P03886 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
MT-ND1P03886 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MT-ND1P03886 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.21■□□□□ 0.51
MT-ND1P03886 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MT-ND1P03886 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.21■□□□□ 0.51
MT-ND1P03886 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.21■□□□□ 0.51
MT-ND1P03886 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.21■□□□□ 0.51
MT-ND1P03886 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
MT-ND1P03886 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
MT-ND1P03886 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-ND1P03886 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MT-ND1P03886 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND1P03886 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
MT-ND1P03886 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
MT-ND1P03886 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
MT-ND1P03886 AC135050.7-201ENST00000624508 2218 ntBASIC18.21■□□□□ 0.5
MT-ND1P03886 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-ND1P03886 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms