Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.44■□□□□ 0.7
VAPBO95292 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
VAPBO95292 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VAPBO95292 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.44■□□□□ 0.7
VAPBO95292 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPBO95292 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VAPBO95292 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPBO95292 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPBO95292 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPBO95292 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.43■□□□□ 0.7
VAPBO95292 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPBO95292 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPBO95292 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.43■□□□□ 0.7
VAPBO95292 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.43■□□□□ 0.7
VAPBO95292 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.43■□□□□ 0.7
VAPBO95292 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.43■□□□□ 0.7
VAPBO95292 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.43■□□□□ 0.7
VAPBO95292 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.43■□□□□ 0.7
VAPBO95292 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPBO95292 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.43■□□□□ 0.7
VAPBO95292 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.42■□□□□ 0.7
VAPBO95292 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.42■□□□□ 0.7
VAPBO95292 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.42■□□□□ 0.7
VAPBO95292 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.42■□□□□ 0.7
VAPBO95292 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VAPBO95292 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VAPBO95292 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VAPBO95292 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPBO95292 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VAPBO95292 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
VAPBO95292 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
VAPBO95292 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.41■□□□□ 0.7
VAPBO95292 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 LINC01465-201ENST00000408887 1940 ntBASIC19.41■□□□□ 0.7
VAPBO95292 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 TEX21P-204ENST00000641479 1693 ntBASIC19.41■□□□□ 0.7
VAPBO95292 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VAPBO95292 TUBB8P6-201ENST00000436895 1288 ntBASIC19.41■□□□□ 0.7
VAPBO95292 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.41■□□□□ 0.7
VAPBO95292 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.41■□□□□ 0.7
VAPBO95292 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 AC104417.2-201ENST00000562989 1793 ntBASIC19.41■□□□□ 0.7
VAPBO95292 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VAPBO95292 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPBO95292 SDHAP1-207ENST00000440850 2000 ntBASIC19.41■□□□□ 0.7
VAPBO95292 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VAPBO95292 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VAPBO95292 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VAPBO95292 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
VAPBO95292 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
VAPBO95292 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.4■□□□□ 0.7
VAPBO95292 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 AP003097.1-201ENST00000530657 1135 ntBASIC19.4■□□□□ 0.7
VAPBO95292 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms