Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.77■□□□□ 0.92
CSPG5O95196 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.77■□□□□ 0.92
CSPG5O95196 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.77■□□□□ 0.92
CSPG5O95196 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.77■□□□□ 0.92
CSPG5O95196 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CSPG5O95196 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG5O95196 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSPG5O95196 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CSPG5O95196 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSPG5O95196 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSPG5O95196 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CSPG5O95196 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG5O95196 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG5O95196 HCG4P8-203ENST00000443049 980 ntBASIC20.76■□□□□ 0.91
CSPG5O95196 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.76■□□□□ 0.91
CSPG5O95196 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.76■□□□□ 0.91
CSPG5O95196 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.76■□□□□ 0.91
CSPG5O95196 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.76■□□□□ 0.91
CSPG5O95196 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG5O95196 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSPG5O95196 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CSPG5O95196 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CSPG5O95196 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CSPG5O95196 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 DUSP5P1-201ENST00000441325 1139 ntBASIC20.75■□□□□ 0.91
CSPG5O95196 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.75■□□□□ 0.91
CSPG5O95196 FAM86EP-206ENST00000510506 987 ntBASIC20.75■□□□□ 0.91
CSPG5O95196 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.75■□□□□ 0.91
CSPG5O95196 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
CSPG5O95196 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG5O95196 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CSPG5O95196 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 AC096733.2-201ENST00000609937 1394 ntBASIC20.74■□□□□ 0.91
CSPG5O95196 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.74■□□□□ 0.91
CSPG5O95196 AL671277.2-201ENST00000458060 996 ntBASIC20.74■□□□□ 0.91
CSPG5O95196 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG5O95196 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.74■□□□□ 0.91
CSPG5O95196 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
CSPG5O95196 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 AL441883.1-201ENST00000566170 1045 ntBASIC20.74■□□□□ 0.91
CSPG5O95196 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CSPG5O95196 AC012313.10-201ENST00000623509 926 ntBASIC20.74■□□□□ 0.91
CSPG5O95196 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG5O95196 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG5O95196 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG5O95196 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSPG5O95196 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.73■□□□□ 0.91
CSPG5O95196 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSPG5O95196 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 SLC25A1P2-201ENST00000430693 912 ntBASIC20.73■□□□□ 0.91
CSPG5O95196 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.73■□□□□ 0.91
CSPG5O95196 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.73■□□□□ 0.91
CSPG5O95196 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CSPG5O95196 AC140113.3-201ENST00000605663 199 ntBASIC20.73■□□□□ 0.91
CSPG5O95196 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.73■□□□□ 0.91
CSPG5O95196 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSPG5O95196 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.73■□□□□ 0.91
CSPG5O95196 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.73■□□□□ 0.91
CSPG5O95196 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG5O95196 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.72■□□□□ 0.91
CSPG5O95196 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSPG5O95196 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CSPG5O95196 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSPG5O95196 AC092338.2-201ENST00000568827 1415 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms