Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC087499.1-201ENST00000418141 1075 ntBASIC18.53■□□□□ 0.56
SNRNP200O75643 AL355355.2-201ENST00000442321 338 ntBASIC18.53■□□□□ 0.56
SNRNP200O75643 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 AC097488.1-201ENST00000507834 756 ntBASIC18.53■□□□□ 0.56
SNRNP200O75643 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.53■□□□□ 0.56
SNRNP200O75643 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP200O75643 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP200O75643 AC004980.1-204ENST00000429707 299 ntBASIC18.52■□□□□ 0.56
SNRNP200O75643 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.52■□□□□ 0.56
SNRNP200O75643 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.52■□□□□ 0.56
SNRNP200O75643 DGCR10-201ENST00000609839 495 ntBASIC18.52■□□□□ 0.56
SNRNP200O75643 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP200O75643 FSCN1P1-201ENST00000568912 1481 ntBASIC18.52■□□□□ 0.56
SNRNP200O75643 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP200O75643 SDHAP1-207ENST00000440850 2000 ntBASIC18.52■□□□□ 0.56
SNRNP200O75643 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.52■□□□□ 0.56
SNRNP200O75643 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP200O75643 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.52■□□□□ 0.55
SNRNP200O75643 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP200O75643 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP200O75643 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.52■□□□□ 0.55
SNRNP200O75643 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.52■□□□□ 0.55
SNRNP200O75643 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.52■□□□□ 0.55
SNRNP200O75643 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
SNRNP200O75643 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP200O75643 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.52■□□□□ 0.55
SNRNP200O75643 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
SNRNP200O75643 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRNP200O75643 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRNP200O75643 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.51■□□□□ 0.55
SNRNP200O75643 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRNP200O75643 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP200O75643 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.51■□□□□ 0.55
SNRNP200O75643 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 AC096733.2-201ENST00000609937 1394 ntBASIC18.5■□□□□ 0.55
SNRNP200O75643 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 FAM207BP-201ENST00000447172 505 ntBASIC18.5■□□□□ 0.55
SNRNP200O75643 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP200O75643 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 AC131212.4-201ENST00000623606 975 ntBASIC18.5■□□□□ 0.55
SNRNP200O75643 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.5■□□□□ 0.55
SNRNP200O75643 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRNP200O75643 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRNP200O75643 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 CYP2D8P-201ENST00000433633 1490 ntBASIC18.5■□□□□ 0.55
SNRNP200O75643 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.5■□□□□ 0.55
SNRNP200O75643 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP200O75643 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP200O75643 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.5■□□□□ 0.55
SNRNP200O75643 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP200O75643 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRNP200O75643 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRNP200O75643 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP200O75643 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP200O75643 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP200O75643 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SNRNP200O75643 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 ECEL1P3-201ENST00000427961 737 ntBASIC18.49■□□□□ 0.55
SNRNP200O75643 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms