Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.8■□□□□ 0.76
CLDN11O75508 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.8■□□□□ 0.76
CLDN11O75508 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN11O75508 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN11O75508 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN11O75508 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN11O75508 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN11O75508 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN11O75508 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CLDN11O75508 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN11O75508 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLDN11O75508 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN11O75508 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN11O75508 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLDN11O75508 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN11O75508 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN11O75508 AC091390.4-202ENST00000476426 537 ntBASIC19.79■□□□□ 0.76
CLDN11O75508 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN11O75508 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN11O75508 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.79■□□□□ 0.76
CLDN11O75508 AP000692.2-201ENST00000608391 879 ntBASIC19.79■□□□□ 0.76
CLDN11O75508 AC073912.3-201ENST00000624414 853 ntBASIC19.79■□□□□ 0.76
CLDN11O75508 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 KRT8P41-201ENST00000533985 1514 ntBASIC19.79■□□□□ 0.76
CLDN11O75508 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN11O75508 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN11O75508 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN11O75508 AC079598.2-202ENST00000546624 1451 ntBASIC19.79■□□□□ 0.76
CLDN11O75508 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN11O75508 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLDN11O75508 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN11O75508 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN11O75508 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.78■□□□□ 0.76
CLDN11O75508 FAM207BP-201ENST00000447172 505 ntBASIC19.78■□□□□ 0.76
CLDN11O75508 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN11O75508 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN11O75508 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN11O75508 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 AP000525.1-201ENST00000608286 694 ntBASIC19.78■□□□□ 0.76
CLDN11O75508 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLDN11O75508 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN11O75508 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 AFG3L1P-217ENST00000557444 2447 ntBASIC19.77■□□□□ 0.76
CLDN11O75508 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLDN11O75508 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 AC008040.2-201ENST00000461049 708 ntBASIC19.77■□□□□ 0.76
CLDN11O75508 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN11O75508 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN11O75508 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.77■□□□□ 0.76
CLDN11O75508 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN11O75508 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CLDN11O75508 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN11O75508 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN11O75508 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN11O75508 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN11O75508 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN11O75508 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN11O75508 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN11O75508 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN11O75508 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN11O75508 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN11O75508 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 FITM1-202ENST00000559294 800 ntBASIC19.76■□□□□ 0.75
CLDN11O75508 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN11O75508 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN11O75508 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms