Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN2BO60939 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SCN2BO60939 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN2BO60939 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SCN2BO60939 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN2BO60939 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN2BO60939 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN2BO60939 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN2BO60939 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN2BO60939 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.34■□□□□ 0.53
SCN2BO60939 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN2BO60939 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN2BO60939 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN2BO60939 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN2BO60939 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SCN2BO60939 SDHAP1-207ENST00000440850 2000 ntBASIC18.33■□□□□ 0.53
SCN2BO60939 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.33■□□□□ 0.53
SCN2BO60939 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.33■□□□□ 0.53
SCN2BO60939 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCN2BO60939 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCN2BO60939 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN2BO60939 SLC29A4P1-201ENST00000398760 971 ntBASIC18.33■□□□□ 0.52
SCN2BO60939 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 MIR4758-201ENST00000577688 71 ntBASIC18.33■□□□□ 0.52
SCN2BO60939 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN2BO60939 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.33■□□□□ 0.52
SCN2BO60939 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 AC092368.3-202ENST00000574180 1591 ntBASIC18.33■□□□□ 0.52
SCN2BO60939 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SCN2BO60939 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCN2BO60939 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN2BO60939 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCN2BO60939 AL138781.2-201ENST00000617896 1843 ntBASIC18.33■□□□□ 0.52
SCN2BO60939 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCN2BO60939 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.32■□□□□ 0.52
SCN2BO60939 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN2BO60939 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 AC097658.1-201ENST00000475555 843 ntBASIC18.32■□□□□ 0.52
SCN2BO60939 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN2BO60939 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.32■□□□□ 0.52
SCN2BO60939 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN2BO60939 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.32■□□□□ 0.52
SCN2BO60939 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN2BO60939 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN2BO60939 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN2BO60939 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN2BO60939 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCN2BO60939 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN2BO60939 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SCN2BO60939 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN2BO60939 AC006333.2-201ENST00000607957 2099 ntBASIC18.31■□□□□ 0.52
SCN2BO60939 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms