Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
HCN1O60741 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HCN1O60741 KRT8P20-201ENST00000423953 1409 ntBASIC18.07■□□□□ 0.48
HCN1O60741 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.07■□□□□ 0.48
HCN1O60741 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.07■□□□□ 0.48
HCN1O60741 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HCN1O60741 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.07■□□□□ 0.48
HCN1O60741 AL596275.1-201ENST00000423464 877 ntBASIC18.07■□□□□ 0.48
HCN1O60741 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HCN1O60741 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.07■□□□□ 0.48
HCN1O60741 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.07■□□□□ 0.48
HCN1O60741 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCN1O60741 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.06■□□□□ 0.48
HCN1O60741 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HCN1O60741 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
HCN1O60741 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HCN1O60741 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HCN1O60741 KRASP1-201ENST00000407852 552 ntBASIC18.06■□□□□ 0.48
HCN1O60741 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.06■□□□□ 0.48
HCN1O60741 AL031963.3-201ENST00000606441 850 ntBASIC18.06■□□□□ 0.48
HCN1O60741 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.06■□□□□ 0.48
HCN1O60741 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 KRT8P17-201ENST00000453110 1448 ntBASIC18.06■□□□□ 0.48
HCN1O60741 AL135905.2-201ENST00000584934 1404 ntBASIC18.06■□□□□ 0.48
HCN1O60741 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.06■□□□□ 0.48
HCN1O60741 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCN1O60741 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN1O60741 PTBP1P-201ENST00000554374 1601 ntBASIC18.05■□□□□ 0.48
HCN1O60741 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HCN1O60741 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HCN1O60741 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 AC012618.2-201ENST00000428058 849 ntBASIC18.05■□□□□ 0.48
HCN1O60741 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.05■□□□□ 0.48
HCN1O60741 AL121906.2-201ENST00000621597 723 ntBASIC18.05■□□□□ 0.48
HCN1O60741 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.05■□□□□ 0.48
HCN1O60741 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.05■□□□□ 0.48
HCN1O60741 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 KRT16P6-202ENST00000425692 1426 ntBASIC18.05■□□□□ 0.48
HCN1O60741 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
HCN1O60741 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
HCN1O60741 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCN1O60741 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
HCN1O60741 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
HCN1O60741 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HCN1O60741 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HCN1O60741 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN1O60741 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.04■□□□□ 0.48
HCN1O60741 Z99916.2-201ENST00000604037 246 ntBASIC18.04■□□□□ 0.48
HCN1O60741 AP001412.1-201ENST00000608405 714 ntBASIC18.04■□□□□ 0.48
HCN1O60741 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.04■□□□□ 0.48
HCN1O60741 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.04■□□□□ 0.48
HCN1O60741 AP000974.1-201ENST00000623909 2387 ntBASIC18.04■□□□□ 0.48
HCN1O60741 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
HCN1O60741 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 AC009237.14-201ENST00000609975 1594 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms