Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL13O43927 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.35■□□□□ 0.37
CXCL13O43927 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.35■□□□□ 0.37
CXCL13O43927 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL13O43927 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
CXCL13O43927 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.35■□□□□ 0.37
CXCL13O43927 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.35■□□□□ 0.37
CXCL13O43927 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
CXCL13O43927 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.35■□□□□ 0.37
CXCL13O43927 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CXCL13O43927 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CXCL13O43927 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL13O43927 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.35■□□□□ 0.37
CXCL13O43927 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CXCL13O43927 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.35■□□□□ 0.37
CXCL13O43927 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CXCL13O43927 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CXCL13O43927 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCL13O43927 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCL13O43927 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CXCL13O43927 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCL13O43927 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCL13O43927 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCL13O43927 AL160286.2-201ENST00000567150 934 ntBASIC17.34■□□□□ 0.37
CXCL13O43927 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCL13O43927 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCL13O43927 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CXCL13O43927 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCL13O43927 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL13O43927 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.33■□□□□ 0.37
CXCL13O43927 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.33■□□□□ 0.37
CXCL13O43927 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.33■□□□□ 0.37
CXCL13O43927 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL13O43927 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL13O43927 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL13O43927 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL13O43927 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCL13O43927 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CXCL13O43927 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.33■□□□□ 0.36
CXCL13O43927 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.33■□□□□ 0.36
CXCL13O43927 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.33■□□□□ 0.36
CXCL13O43927 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.33■□□□□ 0.36
CXCL13O43927 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.33■□□□□ 0.36
CXCL13O43927 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CXCL13O43927 AL355075.4-201ENST00000554988 638 ntBASIC17.33■□□□□ 0.36
CXCL13O43927 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 AL158211.5-201ENST00000623583 2518 ntBASIC17.33■□□□□ 0.36
CXCL13O43927 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
CXCL13O43927 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL13O43927 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CXCL13O43927 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CXCL13O43927 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCL13O43927 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CXCL13O43927 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCL13O43927 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCL13O43927 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCL13O43927 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CXCL13O43927 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCL13O43927 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCL13O43927 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.32■□□□□ 0.36
CXCL13O43927 TSPY15P-201ENST00000457163 923 ntBASIC17.32■□□□□ 0.36
CXCL13O43927 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.32■□□□□ 0.36
CXCL13O43927 AC026271.3-201ENST00000571884 352 ntBASIC17.32■□□□□ 0.36
CXCL13O43927 REXO1L10P-201ENST00000615707 1290 ntBASIC17.32■□□□□ 0.36
CXCL13O43927 REXO1L12P-201ENST00000622156 912 ntBASIC17.32■□□□□ 0.36
CXCL13O43927 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCL13O43927 ZNF815P-204ENST00000434898 1737 ntBASIC17.32■□□□□ 0.36
CXCL13O43927 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CXCL13O43927 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL13O43927 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CXCL13O43927 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCL13O43927 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCL13O43927 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CXCL13O43927 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms