Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD6O43541 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD6O43541 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD6O43541 AC097488.1-201ENST00000507834 756 ntBASIC19.59■□□□□ 0.73
SMAD6O43541 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.59■□□□□ 0.73
SMAD6O43541 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SMAD6O43541 AP000692.2-201ENST00000608391 879 ntBASIC19.59■□□□□ 0.73
SMAD6O43541 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SMAD6O43541 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD6O43541 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.59■□□□□ 0.73
SMAD6O43541 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMAD6O43541 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD6O43541 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD6O43541 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SMAD6O43541 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD6O43541 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD6O43541 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.58■□□□□ 0.73
SMAD6O43541 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.58■□□□□ 0.73
SMAD6O43541 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD6O43541 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD6O43541 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD6O43541 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD6O43541 SLC25A1P4-201ENST00000567977 778 ntBASIC19.58■□□□□ 0.72
SMAD6O43541 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD6O43541 DGCR10-201ENST00000609839 495 ntBASIC19.58■□□□□ 0.72
SMAD6O43541 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD6O43541 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD6O43541 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.58■□□□□ 0.72
SMAD6O43541 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD6O43541 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.57■□□□□ 0.72
SMAD6O43541 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.57■□□□□ 0.72
SMAD6O43541 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SMAD6O43541 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SMAD6O43541 CRYGFP-201ENST00000418459 633 ntBASIC19.57■□□□□ 0.72
SMAD6O43541 FAM207BP-201ENST00000447172 505 ntBASIC19.57■□□□□ 0.72
SMAD6O43541 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.57■□□□□ 0.72
SMAD6O43541 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.57■□□□□ 0.72
SMAD6O43541 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.57■□□□□ 0.72
SMAD6O43541 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.57■□□□□ 0.72
SMAD6O43541 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.57■□□□□ 0.72
SMAD6O43541 AC012306.2-201ENST00000609350 630 ntBASIC19.57■□□□□ 0.72
SMAD6O43541 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.57■□□□□ 0.72
SMAD6O43541 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SMAD6O43541 SDHAP1-207ENST00000440850 2000 ntBASIC19.57■□□□□ 0.72
SMAD6O43541 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.57■□□□□ 0.72
SMAD6O43541 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SMAD6O43541 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD6O43541 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.57■□□□□ 0.72
SMAD6O43541 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
SMAD6O43541 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
SMAD6O43541 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.56■□□□□ 0.72
SMAD6O43541 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SMAD6O43541 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SMAD6O43541 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.56■□□□□ 0.72
SMAD6O43541 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD6O43541 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SMAD6O43541 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD6O43541 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SMAD6O43541 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.55■□□□□ 0.72
SMAD6O43541 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SMAD6O43541 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD6O43541 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.55■□□□□ 0.72
SMAD6O43541 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.55■□□□□ 0.72
SMAD6O43541 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.55■□□□□ 0.72
SMAD6O43541 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.55■□□□□ 0.72
SMAD6O43541 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.55■□□□□ 0.72
SMAD6O43541 LINC01023-201ENST00000606054 436 ntBASIC19.55■□□□□ 0.72
SMAD6O43541 AC010947.1-201ENST00000623454 693 ntBASIC19.55■□□□□ 0.72
SMAD6O43541 AC097493.4-201ENST00000641197 219 ntBASIC19.55■□□□□ 0.72
SMAD6O43541 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD6O43541 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD6O43541 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms