Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.23■□□□□ 0.67
PHGDHO43175 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.23■□□□□ 0.67
PHGDHO43175 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.23■□□□□ 0.67
PHGDHO43175 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
PHGDHO43175 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PHGDHO43175 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHGDHO43175 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PHGDHO43175 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 SDHAP1-207ENST00000440850 2000 ntBASIC19.22■□□□□ 0.67
PHGDHO43175 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 AP006587.1-201ENST00000534129 1502 ntBASIC19.22■□□□□ 0.67
PHGDHO43175 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 AC060766.5-201ENST00000590539 871 ntBASIC19.22■□□□□ 0.67
PHGDHO43175 AL121906.2-201ENST00000621597 723 ntBASIC19.22■□□□□ 0.67
PHGDHO43175 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PHGDHO43175 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHGDHO43175 AC020763.4-201ENST00000623414 4170 ntBASIC19.22■□□□□ 0.67
PHGDHO43175 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PHGDHO43175 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.21■□□□□ 0.67
PHGDHO43175 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.21■□□□□ 0.67
PHGDHO43175 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PHGDHO43175 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.21■□□□□ 0.67
PHGDHO43175 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.21■□□□□ 0.67
PHGDHO43175 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.21■□□□□ 0.67
PHGDHO43175 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.21■□□□□ 0.67
PHGDHO43175 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.21■□□□□ 0.67
PHGDHO43175 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.21■□□□□ 0.67
PHGDHO43175 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PHGDHO43175 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.21■□□□□ 0.67
PHGDHO43175 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PHGDHO43175 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PHGDHO43175 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHGDHO43175 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.21■□□□□ 0.67
PHGDHO43175 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PHGDHO43175 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PHGDHO43175 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PHGDHO43175 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 AC104417.2-201ENST00000562989 1793 ntBASIC19.2■□□□□ 0.66
PHGDHO43175 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms