Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
CASQ2O14958 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.38■□□□□ 0.53
CASQ2O14958 FAM21FP-204ENST00000608637 956 ntBASIC18.38■□□□□ 0.53
CASQ2O14958 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.38■□□□□ 0.53
CASQ2O14958 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CASQ2O14958 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.38■□□□□ 0.53
CASQ2O14958 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASQ2O14958 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CASQ2O14958 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CASQ2O14958 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CASQ2O14958 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CASQ2O14958 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CASQ2O14958 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASQ2O14958 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.37■□□□□ 0.53
CASQ2O14958 AL512631.2-201ENST00000604634 923 ntBASIC18.37■□□□□ 0.53
CASQ2O14958 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.37■□□□□ 0.53
CASQ2O14958 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CASQ2O14958 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.37■□□□□ 0.53
CASQ2O14958 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASQ2O14958 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASQ2O14958 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CASQ2O14958 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CASQ2O14958 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASQ2O14958 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASQ2O14958 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.36■□□□□ 0.53
CASQ2O14958 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CASQ2O14958 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CASQ2O14958 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.36■□□□□ 0.53
CASQ2O14958 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CASQ2O14958 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.36■□□□□ 0.53
CASQ2O14958 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.36■□□□□ 0.53
CASQ2O14958 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASQ2O14958 TEX21P-204ENST00000641479 1693 ntBASIC18.36■□□□□ 0.53
CASQ2O14958 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASQ2O14958 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CASQ2O14958 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CASQ2O14958 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.35■□□□□ 0.53
CASQ2O14958 BX842568.3-201ENST00000418104 571 ntBASIC18.35■□□□□ 0.53
CASQ2O14958 IGHV3-19-201ENST00000521488 291 ntBASIC18.35■□□□□ 0.53
CASQ2O14958 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
CASQ2O14958 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CASQ2O14958 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CASQ2O14958 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASQ2O14958 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms