Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC005332.7-201ENST00000614046 2005 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH17O14917 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH17O14917 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH17O14917 TFP1-202ENST00000475455 1573 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH17O14917 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH17O14917 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH17O14917 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDH17O14917 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH17O14917 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH17O14917 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH17O14917 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDH17O14917 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDH17O14917 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH17O14917 TREX1-205ENST00000625293 1783 ntBASIC18.45■□□□□ 0.54
PCDH17O14917 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH17O14917 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 AP002982.1-201ENST00000492365 877 ntBASIC18.45■□□□□ 0.54
PCDH17O14917 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 AC113410.3-201ENST00000623366 203 ntBASIC18.45■□□□□ 0.54
PCDH17O14917 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDH17O14917 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 AC093484.2-201ENST00000580996 2166 ntBASIC18.45■□□□□ 0.54
PCDH17O14917 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH17O14917 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH17O14917 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH17O14917 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.44■□□□□ 0.54
PCDH17O14917 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDH17O14917 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH17O14917 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH17O14917 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH17O14917 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 AC018553.1-201ENST00000616682 1458 ntBASIC18.44■□□□□ 0.54
PCDH17O14917 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH17O14917 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH17O14917 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH17O14917 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms