Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 Z82202.1-201ENST00000623446 1880 ntBASIC24.94■■□□□ 1.58
CHL1O00533 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.94■■□□□ 1.58
CHL1O00533 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHL1O00533 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.94■■□□□ 1.58
CHL1O00533 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHL1O00533 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.94■■□□□ 1.58
CHL1O00533 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.94■■□□□ 1.58
CHL1O00533 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHL1O00533 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHL1O00533 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CHL1O00533 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHL1O00533 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.93■■□□□ 1.58
CHL1O00533 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
CHL1O00533 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.93■■□□□ 1.58
CHL1O00533 NAPSB-206ENST00000562112 1266 ntBASIC24.93■■□□□ 1.58
CHL1O00533 CKBP1-201ENST00000565489 1086 ntBASIC24.93■■□□□ 1.58
CHL1O00533 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHL1O00533 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.93■■□□□ 1.58
CHL1O00533 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHL1O00533 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHL1O00533 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.93■■□□□ 1.58
CHL1O00533 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.93■■□□□ 1.58
CHL1O00533 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHL1O00533 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.92■■□□□ 1.58
CHL1O00533 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.92■■□□□ 1.58
CHL1O00533 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.92■■□□□ 1.58
CHL1O00533 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CHL1O00533 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 TSPY14P-201ENST00000303979 915 ntBASIC24.92■■□□□ 1.58
CHL1O00533 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CHL1O00533 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
CHL1O00533 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
CHL1O00533 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.92■■□□□ 1.58
CHL1O00533 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.92■■□□□ 1.58
CHL1O00533 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.92■■□□□ 1.58
CHL1O00533 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHL1O00533 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.91■■□□□ 1.58
CHL1O00533 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.91■■□□□ 1.58
CHL1O00533 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.91■■□□□ 1.58
CHL1O00533 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.91■■□□□ 1.58
CHL1O00533 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.91■■□□□ 1.58
CHL1O00533 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.91■■□□□ 1.58
CHL1O00533 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.91■■□□□ 1.58
CHL1O00533 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.91■■□□□ 1.58
CHL1O00533 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.91■■□□□ 1.58
CHL1O00533 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CHL1O00533 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
CHL1O00533 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 LINC01568-207ENST00000641790 1380 ntBASIC24.91■■□□□ 1.58
CHL1O00533 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CHL1O00533 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHL1O00533 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHL1O00533 INGX-201ENST00000359239 846 ntBASIC24.9■■□□□ 1.58
CHL1O00533 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHL1O00533 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 EGLN1P1-201ENST00000531623 762 ntBASIC24.9■■□□□ 1.58
CHL1O00533 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.9■■□□□ 1.58
CHL1O00533 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHL1O00533 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHL1O00533 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.9■■□□□ 1.58
CHL1O00533 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHL1O00533 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHL1O00533 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHL1O00533 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CHL1O00533 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHL1O00533 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.89■■□□□ 1.58
CHL1O00533 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHL1O00533 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC24.89■■□□□ 1.58
CHL1O00533 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CHL1O00533 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.89■■□□□ 1.58
CHL1O00533 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CHL1O00533 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.89■■□□□ 1.58
CHL1O00533 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms