Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.63■□□□□ 0.89
O00370 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.63■□□□□ 0.89
O00370 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.63■□□□□ 0.89
O00370 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
O00370 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.63■□□□□ 0.89
O00370 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
O00370 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
O00370 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.63■□□□□ 0.89
O00370 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 UBE2SP1-201ENST00000450587 669 ntBASIC20.63■□□□□ 0.89
O00370 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.63■□□□□ 0.89
O00370 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.63■□□□□ 0.89
O00370 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
O00370 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
O00370 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
O00370 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
O00370 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
O00370 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.62■□□□□ 0.89
O00370 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
O00370 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.62■□□□□ 0.89
O00370 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
O00370 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 HTR7P1-201ENST00000538670 1336 ntBASIC20.62■□□□□ 0.89
O00370 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
O00370 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.62■□□□□ 0.89
O00370 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.62■□□□□ 0.89
O00370 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.62■□□□□ 0.89
O00370 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 RARRES2P10-201ENST00000564312 460 ntBASIC20.62■□□□□ 0.89
O00370 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
O00370 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
O00370 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
O00370 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
O00370 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
O00370 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.61■□□□□ 0.89
O00370 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
O00370 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.61■□□□□ 0.89
O00370 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.61■□□□□ 0.89
O00370 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
O00370 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.61■□□□□ 0.89
O00370 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.61■□□□□ 0.89
O00370 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.61■□□□□ 0.89
O00370 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
O00370 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 Z82202.1-201ENST00000623446 1880 ntBASIC20.6■□□□□ 0.89
O00370 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.6■□□□□ 0.89
O00370 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
O00370 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.6■□□□□ 0.89
O00370 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.6■□□□□ 0.89
O00370 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
O00370 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 HLA-A-209ENST00000638375 975 ntBASIC20.6■□□□□ 0.89
O00370 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.6■□□□□ 0.89
O00370 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.6■□□□□ 0.89
O00370 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
O00370 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
O00370 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
O00370 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
O00370 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
O00370 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.59■□□□□ 0.89
O00370 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 ZNF815P-204ENST00000434898 1737 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms