Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC7O00311 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC7O00311 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.98■□□□□ 0.63
CDC7O00311 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.98■□□□□ 0.63
CDC7O00311 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDC7O00311 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDC7O00311 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDC7O00311 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CDC7O00311 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC7O00311 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC7O00311 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CDC7O00311 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
CDC7O00311 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 AIRN-201ENST00000601203 4374 ntBASIC18.97■□□□□ 0.63
CDC7O00311 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC7O00311 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDC7O00311 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC7O00311 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 AC026366.1-201ENST00000488803 879 ntBASIC18.97■□□□□ 0.63
CDC7O00311 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.97■□□□□ 0.63
CDC7O00311 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.97■□□□□ 0.63
CDC7O00311 KRT18P6-201ENST00000555540 1265 ntBASIC18.97■□□□□ 0.63
CDC7O00311 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.97■□□□□ 0.63
CDC7O00311 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.97■□□□□ 0.63
CDC7O00311 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDC7O00311 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC7O00311 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC7O00311 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDC7O00311 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC7O00311 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.96■□□□□ 0.63
CDC7O00311 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.96■□□□□ 0.63
CDC7O00311 AC069544.1-201ENST00000609399 999 ntBASIC18.96■□□□□ 0.63
CDC7O00311 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDC7O00311 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDC7O00311 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.96■□□□□ 0.63
CDC7O00311 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.96■□□□□ 0.63
CDC7O00311 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.96■□□□□ 0.63
CDC7O00311 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC7O00311 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC7O00311 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDC7O00311 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDC7O00311 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDC7O00311 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms