Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 AL390955.1-201ENST00000428694 934 ntBASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 AC116562.2-201ENST00000507042 360 ntBASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 AC010331.1-201ENST00000611423 582 ntBASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 MIR6786-201ENST00000616843 113 ntBASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 TMEM179-206ENST00000616017 1645 ntBASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA2E9PIF3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 KRT18P16-201ENST00000510337 1294 ntBASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NPIPA2E9PIF3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 RCN1P1-201ENST00000400413 996 ntBASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 AL445675.2-201ENST00000620291 557 ntBASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 AC009237.14-201ENST00000609975 1594 ntBASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPA2E9PIF3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA2E9PIF3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms