Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 AC008040.2-201ENST00000461049 708 ntBASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.21■□□□□ 0.83
YJEFN3A6XGL0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 FSCN1P1-201ENST00000568912 1481 ntBASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 KRT8P41-201ENST00000533985 1514 ntBASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
YJEFN3A6XGL0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 AC130371.2-201ENST00000619443 611 ntBASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YJEFN3A6XGL0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC004951.3-201ENST00000418645 1148 ntBASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 RBM17P1-201ENST00000453646 1190 ntBASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC091390.4-202ENST00000476426 537 ntBASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms