Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 RNF165-205ENST00000588679 2904 ntBASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM90A16PA6NEW6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 AC006333.2-201ENST00000607957 2099 ntBASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 FP475955.4-201ENST00000623131 1990 ntBASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 AL355802.2-201ENST00000402069 882 ntBASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FAM90A16PA6NEW6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 AC093525.10-201ENST00000625130 1569 ntBASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 TUBB8P6-201ENST00000436895 1288 ntBASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 PNMA6B-201ENST00000538162 1200 ntBASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM90A16PA6NEW6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FAM90A16PA6NEW6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 SDHAP1-207ENST00000440850 2000 ntBASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 AC120498.8-201ENST00000614275 531 ntBASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms