Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RCCD1A6NED2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
RCCD1A6NED2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.58■□□□□ 0.88
RCCD1A6NED2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RCCD1A6NED2 AL390961.4-201ENST00000623958 2535 ntBASIC20.58■□□□□ 0.88
RCCD1A6NED2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RCCD1A6NED2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RCCD1A6NED2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RCCD1A6NED2 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 BX276092.2-201ENST00000417668 665 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 AC022517.1-201ENST00000592429 346 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 AC006557.6-201ENST00000623071 864 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 MKRN4P-201ENST00000444706 1521 ntBASIC20.57■□□□□ 0.88
RCCD1A6NED2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RCCD1A6NED2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.57■□□□□ 0.88
RCCD1A6NED2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.56■□□□□ 0.88
RCCD1A6NED2 AC092437.1-201ENST00000624794 1048 ntBASIC20.56■□□□□ 0.88
RCCD1A6NED2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RCCD1A6NED2 Z98044.1-201ENST00000632503 1764 ntBASIC20.56■□□□□ 0.88
RCCD1A6NED2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RCCD1A6NED2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.55■□□□□ 0.88
RCCD1A6NED2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 AL133373.2-201ENST00000623187 2828 ntBASIC20.55■□□□□ 0.88
RCCD1A6NED2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RCCD1A6NED2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 AC105036.2-201ENST00000569468 176 ntBASIC20.55■□□□□ 0.88
RCCD1A6NED2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.55■□□□□ 0.88
RCCD1A6NED2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.55■□□□□ 0.88
RCCD1A6NED2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RCCD1A6NED2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RCCD1A6NED2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms