Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC162PA2VCL2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 TSPY20P-201ENST00000450910 630 ntBASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 AC004264.1-201ENST00000608354 794 ntBASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 AC124016.1-201ENST00000609552 612 ntBASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 SDHAP1-207ENST00000440850 2000 ntBASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC162PA2VCL2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCDC162PA2VCL2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC162PA2VCL2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms