Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRDV1A0A1B0GX56 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 AC023632.3-201ENST00000521633 145 ntBASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.03■□□□□ 0.32
TRDV1A0A1B0GX56 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 AC018553.1-201ENST00000616682 1458 ntBASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 MCRIP2P1-201ENST00000394346 511 ntBASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 SUDS3P1-201ENST00000505831 966 ntBASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 AC100791.3-201ENST00000617619 330 ntBASIC17.02■□□□□ 0.32
TRDV1A0A1B0GX56 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.02■□□□□ 0.31
TRDV1A0A1B0GX56 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 AC105020.6-201ENST00000621523 1217 ntBASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 AC004854.2-201ENST00000608450 1441 ntBASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRDV1A0A1B0GX56 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms