Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC007952.6-201ENST00000573168 2673 ntBASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC003957.1-201ENST00000625108 2673 ntBASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 AL135905.2-201ENST00000584934 1404 ntBASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC196A0A1B0GTZ2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 NIFKP9-201ENST00000419265 221 ntBASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 AL445675.2-201ENST00000620291 557 ntBASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC196A0A1B0GTZ2 AL032819.2-201ENST00000624543 2162 ntBASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 KSR1P1-201ENST00000446298 240 ntBASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 AL160286.2-201ENST00000567150 934 ntBASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC196A0A1B0GTZ2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC196A0A1B0GTZ2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCDC196A0A1B0GTZ2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms