Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 AC020763.4-201ENST00000623414 4170 ntBASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 NCF1B-203ENST00000435988 1254 ntBASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 AC092368.3-202ENST00000574180 1591 ntBASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV3A0A0B4J244 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AC104417.2-201ENST00000562989 1793 ntBASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AC098934.4-201ENST00000564127 592 ntBASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 MYC-209ENST00000641252 345 ntBASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV3A0A0B4J244 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 AP006587.1-201ENST00000534129 1502 ntBASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.54■□□□□ 0.08
TRAV3A0A0B4J244 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms