Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 LINC01465-201ENST00000408887 1940 ntBASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 KRT8P45-201ENST00000414328 1447 ntBASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 AC116407.4-201ENST00000623319 1061 ntBASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC187A0A096LP49 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC187A0A096LP49 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 AL121894.2-201ENST00000602977 491 ntBASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC187A0A096LP49 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 FEM1AP1-201ENST00000431297 1995 ntBASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 HCG4P8-203ENST00000443049 980 ntBASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 KRT18P38-201ENST00000449496 1282 ntBASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 VENTXP5-201ENST00000523979 775 ntBASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 AC069148.1-201ENST00000608741 768 ntBASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC187A0A096LP49 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 AL136038.3-201ENST00000561909 1096 ntBASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 NEK4P2-201ENST00000580004 1012 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms