Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.01
HOXD11P31277 SFTPB-201ENST00000393822 3666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 NF1P9-201ENST00000629326 2008 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 PDZPH1P-201ENST00000412514 1783 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 TNC-210ENST00000535648 7508 ntTSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 ACTBP13-201ENST00000423971 3959 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 SLCO2B1-201ENST00000289575 4494 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 MTND5P18-201ENST00000445624 1801 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 OR5BA1P-202ENST00000641215 5464 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
HOXD11P31277 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.76□□□□□ -1.01
HOXD11P31277 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 RNU5F-3P-201ENST00000363767 117 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 RNU6-339P-201ENST00000384310 107 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 MIR92A2-201ENST00000385299 75 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
HOXD11P31277 AL391361.1-201ENST00000405580 489 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 NDUFS5P4-201ENST00000412983 318 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 TREML3P-201ENST00000457327 501 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 RPL23AP24-201ENST00000458203 385 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 RPL23AP70-201ENST00000483361 460 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.76□□□□□ -1.01
HOXD11P31277 SSR2-213ENST00000496742 825 ntTSL 3 BASIC8.76□□□□□ -1.01
HOXD11P31277 RNA5SP395-201ENST00000516567 118 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 RNA5SP471-201ENST00000516971 106 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC8.76□□□□□ -1.01
HOXD11P31277 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC8.76□□□□□ -1.01
HOXD11P31277 AL109933.4-201ENST00000612111 157 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 AC245033.3-201ENST00000617986 224 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 AC239859.6-201ENST00000622095 213 ntBASIC8.76□□□□□ -1.01
HOXD11P31277 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
HOXD11P31277 LINC02280-201ENST00000564585 3816 ntTSL 2 BASIC8.76□□□□□ -1.01
HOXD11P31277 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.76□□□□□ -1.01
HOXD11P31277 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HOXD11P31277 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.75□□□□□ -1.01
HOXD11P31277 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 CEP112-203ENST00000535342 3392 ntAPPRIS P4 TSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.75□□□□□ -1.01
HOXD11P31277 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
HOXD11P31277 RNA5SP218-201ENST00000363188 109 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 RN7SKP93-201ENST00000363838 309 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 RNA5SP336-201ENST00000364189 117 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 SNORD18B-201ENST00000365659 72 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 SNORA29-201ENST00000384183 140 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 RN7SKP100-201ENST00000411258 284 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 FAM183DP-201ENST00000421987 399 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC8.75□□□□□ -1.01
HOXD11P31277 RPL12P46-201ENST00000436610 195 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 RPL10AP3-201ENST00000462503 651 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 RN7SL841P-201ENST00000470547 297 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 RN7SL416P-201ENST00000494042 298 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 HIGD1AP3-201ENST00000515857 278 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 RNA5SP101-201ENST00000517036 108 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 AC134684.1-201ENST00000533883 264 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.75□□□□□ -1.01
HOXD11P31277 AC107958.1-201ENST00000556576 290 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC8.75□□□□□ -1.01
HOXD11P31277 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
HOXD11P31277 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC8.75□□□□□ -1.01
HOXD11P31277 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 AC023824.7-201ENST00000623041 5731 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 PGM3-205ENST00000506587 1971 ntTSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 HERC2P5-201ENST00000562687 3825 ntBASIC8.75□□□□□ -1.01
HOXD11P31277 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
HOXD11P31277 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
HOXD11P31277 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC8.75□□□□□ -1.01
HOXD11P31277 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC8.74□□□□□ -1.01
HOXD11P31277 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms