Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 Z97989.1-201ENST00000531702 2421 ntBASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCUBE3Q8IX30 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 NBPF8-201ENST00000583271 5330 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 OR10R3P-201ENST00000361688 942 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 Y_RNA.496-201ENST00000384444 101 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 MIR541-201ENST00000401360 84 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL136131.1-201ENST00000406079 803 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL591848.1-201ENST00000413092 322 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL663061.1-201ENST00000416625 580 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC083862.1-201ENST00000427378 1242 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 PSMA6P3-201ENST00000428242 164 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 CRYGGP-201ENST00000443337 145 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL121578.2-201ENST00000448797 447 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL049714.1-201ENST00000466686 347 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 RN7SL350P-201ENST00000492591 299 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 RPS4XP14-201ENST00000493072 781 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC114324.2-202ENST00000503812 134 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 HMGN1P9-201ENST00000515212 298 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 RNA5SP318-201ENST00000516352 92 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 SNRPCP6-201ENST00000528310 210 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC128657.1-201ENST00000549459 145 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 MIR4775-201ENST00000581168 75 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC023043.2-201ENST00000589678 1026 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL732372.2-225ENST00000642124 456 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 NCOA4P3-201ENST00000513203 1877 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AL117339.4-201ENST00000608335 7063 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 AC011416.1-201ENST00000514947 1732 ntBASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCUBE3Q8IX30 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AL589993.1-201ENST00000407450 2524 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CLCA3P-203ENST00000490028 2781 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC119674.1-204ENST00000641348 1343 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC022819.1-201ENST00000563495 3910 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RNU1-55P-201ENST00000365510 158 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 SNORD116-11-201ENST00000383882 92 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 UBBP1-201ENST00000392399 473 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 SNORA11B-201ENST00000408175 129 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 OR6E1P-201ENST00000414424 923 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 EIF4EP1-201ENST00000422311 642 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AHCYP8-201ENST00000425108 209 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 PFN1P11-201ENST00000445829 389 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC023194.2-201ENST00000465398 406 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RPL7AP23-201ENST00000482625 776 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms