Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.88□□□□□ -1.79
TMEM53Q6P2H8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.88□□□□□ -1.79
TMEM53Q6P2H8 NCAPGP1-201ENST00000505112 1814 ntBASIC3.88□□□□□ -1.79
TMEM53Q6P2H8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMEM53Q6P2H8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AL132640.2-201ENST00000559968 1698 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 OR11H4-201ENST00000315409 1082 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 MIR3065-201ENST00000390137 79 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC069218.2-201ENST00000411665 344 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AL356387.2-201ENST00000422272 243 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 UBE2V2P3-201ENST00000433562 437 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC083863.1-201ENST00000438811 231 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 HMGB1P5-202ENST00000451497 985 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 Z95152.1-201ENST00000453556 656 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 TVP23BP2-201ENST00000455082 615 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 CFTRP1-201ENST00000456646 183 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC053481.1-201ENST00000467217 306 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC012170.1-201ENST00000495139 359 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC010342.1-201ENST00000514047 877 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 IGLVIV-65-201ENST00000517313 360 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 MIR4330-201ENST00000579077 105 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC115286.1-201ENST00000604298 434 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 Z98200.1-201ENST00000607298 470 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AC012409.3-201ENST00000611343 981 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 AP000346.3-201ENST00000622821 210 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 MTND4P31-201ENST00000425607 1343 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 BDP1P-201ENST00000582658 1990 ntBASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.87□□□□□ -1.79
TMEM53Q6P2H8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AL137100.1-201ENST00000556703 1620 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RNU1-18P-201ENST00000363062 164 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 CCNB2P1-201ENST00000399411 1150 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 SNORA74C-2-201ENST00000411179 201 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AC009480.2-201ENST00000422916 432 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RPEP3-201ENST00000425462 676 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AL732292.1-201ENST00000426692 226 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 DNAJC19P7-201ENST00000428811 344 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 ACTR3P2-201ENST00000439585 1257 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 UBE2V1P3-201ENST00000439651 417 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RPL37P3-201ENST00000456825 293 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RPL7P32-201ENST00000457119 744 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RPL23AP14-201ENST00000468281 468 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 TRAV11-201ENST00000539512 339 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 PCNAP1-202ENST00000595299 752 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 AP003117.2-201ENST00000606010 545 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.86□□□□□ -1.79
TMEM53Q6P2H8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM53Q6P2H8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM53Q6P2H8 OR5P1P-201ENST00000299512 925 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms