Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 AP000560.1-201ENST00000624150 1937 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 GTF2IP1-202ENST00000614592 2047 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 Y_RNA.580-201ENST00000391004 95 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 RNU6-257P-201ENST00000410238 98 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 RNU6-174P-201ENST00000410406 106 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 RN7SKP108-201ENST00000411367 328 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 CYP4F30P-202ENST00000420048 405 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AC010881.1-201ENST00000433830 235 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 RNA5SP272-201ENST00000516095 111 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 IGHVII-78-1-201ENST00000521105 269 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AL158151.4-201ENST00000600965 507 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AC009570.1-201ENST00000609599 745 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AC135050.6-202ENST00000613584 392 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AL118522.2-201ENST00000616045 615 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 RLIMP1-201ENST00000339626 1680 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 AC110774.1-201ENST00000623567 2018 ntBASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SCAF1Q9H7N4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 Y_RNA.127-201ENST00000363386 109 ntBASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 Y_RNA.400-201ENST00000383963 111 ntBASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 Y_RNA.441-201ENST00000384123 112 ntBASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 LINC02555-201ENST00000563933 1951 ntBASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 Z75746.1-201ENST00000440243 2080 ntBASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC11.19□□□□□ -0.62
SCAF1Q9H7N4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 RNA5SP188-201ENST00000362916 129 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 MIR19A-201ENST00000384878 82 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AL136372.1-201ENST00000403060 228 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 Y_RNA.602-201ENST00000410535 92 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AC005840.2-201ENST00000447193 355 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AP000942.1-201ENST00000463969 747 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 RBBP4P6-201ENST00000508098 202 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AC109481.1-201ENST00000509173 282 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 RNU6-426P-201ENST00000516464 97 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AC006363.1-201ENST00000603806 463 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AL161931.1-201ENST00000612768 246 ntBASIC11.18□□□□□ -0.62
SCAF1Q9H7N4 AC015819.1-201ENST00000613588 663 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms