Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AL049833.3-201ENST00000623920 3738 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MROH5-205ENST00000621837 4164 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC007114.2-201ENST00000576014 4281 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC024651.2-201ENST00000562480 2098 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RMRP-202ENST00000363046 264 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA2.2-201ENST00000365473 135 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA18.2-201ENST00000383865 132 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR181A2-201ENST00000384863 110 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AL590635.1-201ENST00000406314 586 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RNA5SP201-201ENST00000410316 124 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SKP137-201ENST00000411074 307 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 GAS5-211ENST00000432536 959 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC074351.1-201ENST00000439413 481 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL10P17-201ENST00000453852 316 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU6-634P-201ENST00000459134 106 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MT1DP-201ENST00000463480 191 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ALG1L11P-201ENST00000511660 450 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU2-35P-201ENST00000516446 142 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 IGLV7-35-201ENST00000523314 340 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AP000785.2-201ENST00000531538 388 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC073176.1-202ENST00000558852 409 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL7AP69-201ENST00000595306 806 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 HSPE1P7-201ENST00000604681 321 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU6-91P-201ENST00000607774 107 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC092278.1-201ENST00000621951 745 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 CECR2-201ENST00000262608 4783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC01613-201ENST00000561476 2780 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SLC9A8-202ENST00000417961 6309 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC008985.1-201ENST00000624169 2239 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AC002543.1-201ENST00000299783 1954 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 AP001528.3-201ENST00000624364 3249 ntBASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP3-3Q9BYR6 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms