Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC128657.1-201ENST00000549459 145 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC009955.2-201ENST00000597288 542 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC107871.2-201ENST00000612894 502 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC025162.2-201ENST00000619602 560 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AC067931.1-201ENST00000624190 671 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL159972.1-201ENST00000625150 448 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-CQ95604 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 OR55B1P-203ENST00000641518 2602 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HLA-CQ95604 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 AC011933.2-201ENST00000578539 2790 ntBASIC7.02□□□□□ -1.29
HLA-CQ95604 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-CQ95604 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
HLA-CQ95604 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC011416.1-201ENST00000514947 1732 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC107081.3-201ENST00000612715 2034 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.01□□□□□ -1.29
HLA-CQ95604 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
HLA-CQ95604 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC7.01□□□□□ -1.29
HLA-CQ95604 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC7.01□□□□□ -1.29
HLA-CQ95604 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 SNORA38B-201ENST00000363524 131 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 Y_RNA.153-201ENST00000363615 91 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 RN7SKP47-201ENST00000365347 328 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 RNY1P14-201ENST00000384426 108 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-CQ95604 BX510359.3-201ENST00000422168 306 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 RPL36AP6-201ENST00000435770 321 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 DNAJC19P5-201ENST00000443295 316 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 AC097463.1-201ENST00000447288 481 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 PPIAP27-201ENST00000453800 265 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 HLA-DPA3-207ENST00000454398 229 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 snoU13.8-201ENST00000458890 104 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
HLA-CQ95604 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-CQ95604 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
HLA-CQ95604 HIGD1AP14-201ENST00000507617 282 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 RNU6-406P-201ENST00000516470 107 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 AC060775.1-201ENST00000518241 520 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 HMGB1P41-201ENST00000520234 440 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 AC100784.1-201ENST00000522790 310 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HLA-CQ95604 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC7.01□□□□□ -1.29
HLA-CQ95604 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC138761.3-201ENST00000579993 334 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 MIR3672-201ENST00000584290 82 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 UBE2L4-201ENST00000587688 464 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC092266.1-201ENST00000610958 165 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 SNORA16A-202ENST00000628458 135 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 CYP3A51P-201ENST00000633513 256 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 AL034408.1-201ENST00000637712 664 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC005261.2-201ENST00000593427 4258 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.01□□□□□ -1.29
HLA-CQ95604 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 AC016583.1-201ENST00000624221 2431 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
HLA-CQ95604 MTND5P30-201ENST00000452896 1731 ntBASIC7.01□□□□□ -1.29
HLA-CQ95604 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-CQ95604 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC7□□□□□ -1.29
HLA-CQ95604 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7□□□□□ -1.29
HLA-CQ95604 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7□□□□□ -1.29
HLA-CQ95604 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HLA-CQ95604 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-CQ95604 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HLA-CQ95604 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms