RNA–Protein interactions for RNA: ENST00000587688.1

UBE2L4-201, Transcript of ubiquitin conjugating enzyme E2 L4 (pseudogene), humanhuman

BASIC

Gene UBE2L4, Length 464 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L4-201ENST00000587688 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
UBE2L4-201ENST00000587688 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
UBE2L4-201ENST00000587688 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
UBE2L4-201ENST00000587688 POTEDQ86YR6 584 aa20.81■□□□□ 0.92
UBE2L4-201ENST00000587688 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
UBE2L4-201ENST00000587688 FOXD1Q16676 465 aa19.7■□□□□ 0.74
UBE2L4-201ENST00000587688 MSH5O43196 834 aa19■□□□□ 0.63
UBE2L4-201ENST00000587688 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
UBE2L4-201ENST00000587688 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
UBE2L4-201ENST00000587688 ADRA2BP18089 450 aa17.2■□□□□ 0.34
UBE2L4-201ENST00000587688 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
UBE2L4-201ENST00000587688 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
UBE2L4-201ENST00000587688 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
UBE2L4-201ENST00000587688 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
UBE2L4-201ENST00000587688 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
UBE2L4-201ENST00000587688 POTEHQ6S545 545 aa16.04■□□□□ 0.16
UBE2L4-201ENST00000587688 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
UBE2L4-201ENST00000587688 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
UBE2L4-201ENST00000587688 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
UBE2L4-201ENST00000587688 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
UBE2L4-201ENST00000587688 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
UBE2L4-201ENST00000587688 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
UBE2L4-201ENST00000587688 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
UBE2L4-201ENST00000587688 DSG3P32926 999 aa14.58□□□□□ -0.08
UBE2L4-201ENST00000587688 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
UBE2L4-201ENST00000587688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBE2L4-201ENST00000587688 SP7Q8TDD2 431 aaPredicted RBP14.42□□□□□ -0.1
UBE2L4-201ENST00000587688 CAPN15O75808 1086 aa14.32□□□□□ -0.12
UBE2L4-201ENST00000587688 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
UBE2L4-201ENST00000587688 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
UBE2L4-201ENST00000587688 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
UBE2L4-201ENST00000587688 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
UBE2L4-201ENST00000587688 ABCB7O75027 752 aa13.86□□□□□ -0.19
UBE2L4-201ENST00000587688 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
UBE2L4-201ENST00000587688 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
UBE2L4-201ENST00000587688 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
UBE2L4-201ENST00000587688 HAX1O00165 279 aa13.64□□□□□ -0.23
UBE2L4-201ENST00000587688 APLP2Q06481 763 aa13.61□□□□□ -0.23
UBE2L4-201ENST00000587688 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
UBE2L4-201ENST00000587688 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
UBE2L4-201ENST00000587688 LHX8Q68G74 356 aa13.48□□□□□ -0.25
UBE2L4-201ENST00000587688 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
UBE2L4-201ENST00000587688 EVX2Q03828 476 aa13.36□□□□□ -0.27
UBE2L4-201ENST00000587688 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
UBE2L4-201ENST00000587688 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBE2L4-201ENST00000587688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
UBE2L4-201ENST00000587688 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
UBE2L4-201ENST00000587688 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
UBE2L4-201ENST00000587688 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
UBE2L4-201ENST00000587688 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
UBE2L4-201ENST00000587688 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
UBE2L4-201ENST00000587688 POLA2Q14181 598 aa13.07□□□□□ -0.32
UBE2L4-201ENST00000587688 GABBR2O75899 941 aa13.01□□□□□ -0.33
UBE2L4-201ENST00000587688 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
UBE2L4-201ENST00000587688 POTEMA6NI47 508 aa12.78□□□□□ -0.36
UBE2L4-201ENST00000587688 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
UBE2L4-201ENST00000587688 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
UBE2L4-201ENST00000587688 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
UBE2L4-201ENST00000587688 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
UBE2L4-201ENST00000587688 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
UBE2L4-201ENST00000587688 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
UBE2L4-201ENST00000587688 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
UBE2L4-201ENST00000587688 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
UBE2L4-201ENST00000587688 CLCN6P51797 869 aa12.4□□□□□ -0.42
UBE2L4-201ENST00000587688 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
UBE2L4-201ENST00000587688 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
UBE2L4-201ENST00000587688 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
UBE2L4-201ENST00000587688 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
UBE2L4-201ENST00000587688 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
UBE2L4-201ENST00000587688 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
UBE2L4-201ENST00000587688 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
UBE2L4-201ENST00000587688 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
UBE2L4-201ENST00000587688 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
UBE2L4-201ENST00000587688 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
UBE2L4-201ENST00000587688 LCE2DQ5TA82 110 aaPredicted RBP12.15□□□□□ -0.46
UBE2L4-201ENST00000587688 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
UBE2L4-201ENST00000587688 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
UBE2L4-201ENST00000587688 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
UBE2L4-201ENST00000587688 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
UBE2L4-201ENST00000587688 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
UBE2L4-201ENST00000587688 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
UBE2L4-201ENST00000587688 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
UBE2L4-201ENST00000587688 KCNA4P22459 653 aa11.9□□□□□ -0.5
UBE2L4-201ENST00000587688 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
UBE2L4-201ENST00000587688 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
UBE2L4-201ENST00000587688 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
UBE2L4-201ENST00000587688 FBLN2P98095 1184 aa11.85□□□□□ -0.51
UBE2L4-201ENST00000587688 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
UBE2L4-201ENST00000587688 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
UBE2L4-201ENST00000587688 MMRN1Q13201 1228 aa11.79□□□□□ -0.52
UBE2L4-201ENST00000587688 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
UBE2L4-201ENST00000587688 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
UBE2L4-201ENST00000587688 C7P10643 843 aa11.7□□□□□ -0.54
UBE2L4-201ENST00000587688 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
UBE2L4-201ENST00000587688 SPNS2Q8IVW8 549 aa11.66□□□□□ -0.54
UBE2L4-201ENST00000587688 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
UBE2L4-201ENST00000587688 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBE2L4-201ENST00000587688 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
UBE2L4-201ENST00000587688 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
UBE2L4-201ENST00000587688 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms