Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC008627.1-201ENST00000517511 1704 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 RNU6-1115P-201ENST00000362490 106 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 RNU6-238P-201ENST00000363313 106 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 MIR1204-201ENST00000408388 67 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 RPL7P10-201ENST00000417407 739 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 RN7SL714P-201ENST00000487050 298 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 RNA5SP438-201ENST00000516561 112 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC090502.2-201ENST00000549267 280 ntBASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
PHF8Q9UPP1 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AL137058.3-201ENST00000624531 3099 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 Y_RNA.80-201ENST00000362996 102 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RNA5SP242-201ENST00000364171 118 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RN7SKP292-201ENST00000365522 317 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 Y_RNA.455-201ENST00000384230 98 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 SNORA19-201ENST00000384737 128 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RN7SKP121-201ENST00000410842 305 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 ARL5AP1-201ENST00000418991 388 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 BRWD1P3-201ENST00000428816 390 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 TRAPPC2P3-201ENST00000443200 321 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 CFL1P4-201ENST00000451536 498 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 MIR2053-201ENST00000459295 91 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC011476.1-201ENST00000466725 307 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RN7SL326P-201ENST00000477493 296 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC106872.2-201ENST00000494303 480 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC008945.1-201ENST00000505144 499 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 SSX8-201ENST00000506270 579 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RN7SKP24-201ENST00000515888 284 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 SCARNA6.1-201ENST00000516989 238 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AP001804.3-201ENST00000525146 880 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC090525.3-201ENST00000605601 189 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC022467.1-201ENST00000614738 749 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 U2.1-201ENST00000618978 145 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 MRPL57P1-201ENST00000621486 265 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 VPS35P1-201ENST00000563400 1518 ntBASIC8.74□□□□□ -1.01
PHF8Q9UPP1 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.74□□□□□ -1.01
PHF8Q9UPP1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms