Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 MIR3176-201ENST00000582210 90 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 RN7SL404P-201ENST00000582421 281 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 GLUD1P4-201ENST00000590914 418 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC092447.9-201ENST00000603395 144 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC024884.1-201ENST00000620583 399 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AC103858.2-201ENST00000621471 543 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AL049767.1-202ENST00000637826 242 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 AL354702.2-202ENST00000641481 890 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 CDY11P-201ENST00000447168 1651 ntBASIC7.41□□□□□ -1.22
LRCH3Q96II8 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LRCH3Q96II8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LRCH3Q96II8 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC092111.1-201ENST00000618256 3358 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 DLEU2L-201ENST00000371086 3555 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC005614.1-201ENST00000598952 3653 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 Y_RNA.106-201ENST00000363189 100 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RNU6-744P-201ENST00000365557 107 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 Y_RNA.428-201ENST00000384078 102 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RNU6-1316P-201ENST00000384242 108 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 UBE2V1P2-201ENST00000397758 440 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RNU4-25P-201ENST00000410569 230 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 OR6C66P-201ENST00000414917 930 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 RPS7P5-201ENST00000441482 581 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC002381.1-201ENST00000447049 280 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC013470.1-201ENST00000453438 462 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 AL049714.1-201ENST00000466686 347 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 RNU6-470P-201ENST00000515954 104 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RNU6-1016P-201ENST00000516689 94 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RN7SKP99-201ENST00000517028 307 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RNU6-111P-201ENST00000517179 105 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 RN7SKP35-201ENST00000517210 151 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LRCH3Q96II8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 SS18L2P2-201ENST00000583960 235 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC7.4□□□□□ -1.22
LRCH3Q96II8 AC090525.3-201ENST00000605601 189 ntBASIC7.4□□□□□ -1.22
LRCH3Q96II8 TRIM51HP-202ENST00000530412 1823 ntBASIC7.4□□□□□ -1.23
LRCH3Q96II8 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
LRCH3Q96II8 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LRCH3Q96II8 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LRCH3Q96II8 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.39□□□□□ -1.23
LRCH3Q96II8 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LRCH3Q96II8 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
LRCH3Q96II8 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
LRCH3Q96II8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LRCH3Q96II8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms