Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC110588.1-201ENST00000559699 137 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 AL691477.1-201ENST00000624398 162 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 HSPA8P18-201ENST00000439846 1928 ntBASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PRPF38BQ5VTL8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AL512662.1-201ENST00000624850 2251 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNU4-66P-201ENST00000365199 138 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-1318P-201ENST00000365389 103 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 PRRC2CP1-201ENST00000404428 159 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 PRELID1P2-201ENST00000407805 396 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-193P-201ENST00000410977 107 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-1304P-201ENST00000411374 106 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AC016397.1-201ENST00000412463 242 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AC048351.1-201ENST00000420064 602 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AL035660.1-201ENST00000422041 222 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AC012181.1-201ENST00000479895 423 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 BX510359.5-201ENST00000515651 304 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-794P-201ENST00000517261 64 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-988P-201ENST00000519081 107 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 ZNF705CP-201ENST00000530515 889 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 LSM6P2-201ENST00000552208 177 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RN7SL178P-201ENST00000582930 304 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AL049539.1-201ENST00000611964 459 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 AL359757.2-201ENST00000624309 274 ntBASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PRPF38BQ5VTL8 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 SNORA38B-201ENST00000363524 131 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RNU4-48P-201ENST00000365559 182 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-1013P-201ENST00000384180 107 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-308P-201ENST00000390957 107 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC016769.3-201ENST00000396562 315 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AL023807.1-201ENST00000407932 359 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RPL36AP36-201ENST00000418616 301 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 USP24P1-201ENST00000433802 779 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-123P-201ENST00000516163 102 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 Y_RNA.665-201ENST00000516177 98 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RNA5SP206-201ENST00000516703 121 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 RPL7P20-201ENST00000520308 745 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 MRPS16P1-201ENST00000523462 412 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 COX6CP5-201ENST00000527162 228 ntBASIC7.19□□□□□ -1.26
PRPF38BQ5VTL8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms