Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PKP4Q99569 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PKP4Q99569 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.63□□□□□ -1.67
PKP4Q99569 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 MIR550A3-201ENST00000390735 95 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.63□□□□□ -1.67
PKP4Q99569 RNU2-17P-201ENST00000410290 190 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 MTCO1P43-201ENST00000431831 488 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC008072.1-201ENST00000434254 824 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 USP9YP24-201ENST00000434374 697 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.63□□□□□ -1.67
PKP4Q99569 USP9YP17-201ENST00000444617 696 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC092685.1-201ENST00000447960 1243 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC091685.2-201ENST00000454924 864 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 RPS20P4-201ENST00000461659 355 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 MTND4LP2-201ENST00000502312 285 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 SCARNA22-201ENST00000503991 125 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC073358.1-201ENST00000505671 684 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 RNU1-6P-201ENST00000516290 144 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 SNORA31.13-201ENST00000516624 135 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.63□□□□□ -1.67
PKP4Q99569 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.63□□□□□ -1.67
PKP4Q99569 PCNPP1-201ENST00000552501 511 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC104229.1-201ENST00000561364 255 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC145350.1-201ENST00000567426 208 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.63□□□□□ -1.67
PKP4Q99569 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 AC011374.2-201ENST00000607135 526 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.63□□□□□ -1.67
PKP4Q99569 AC015871.5-202ENST00000623252 701 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AP003485.2-201ENST00000623636 610 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 AC092162.3-201ENST00000624511 1624 ntBASIC4.63□□□□□ -1.67
PKP4Q99569 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.63□□□□□ -1.67
PKP4Q99569 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKP4Q99569 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.63□□□□□ -1.67
PKP4Q99569 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.63□□□□□ -1.67
PKP4Q99569 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 AL442639.1-201ENST00000625030 1899 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.62□□□□□ -1.67
PKP4Q99569 Z73965.1-201ENST00000623412 2297 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 AC007390.2-201ENST00000606229 3803 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PKP4Q99569 AL445487.1-201ENST00000415694 1580 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.62□□□□□ -1.67
PKP4Q99569 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.62□□□□□ -1.67
PKP4Q99569 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 RNU6-481P-201ENST00000384194 107 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 SNORD116-2-201ENST00000384274 95 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 SNORD116-6-201ENST00000384711 96 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 ATP5F1P2-201ENST00000398143 760 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 AL049545.1-201ENST00000401856 572 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 LINC01881-201ENST00000416103 412 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 LINC01347-201ENST00000417964 355 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.62□□□□□ -1.67
PKP4Q99569 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 BX119904.1-201ENST00000432026 348 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 NRBF2P3-201ENST00000432731 865 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.62□□□□□ -1.67
PKP4Q99569 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 AL353093.1-201ENST00000441292 436 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 VN1R25P-201ENST00000443385 738 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.62□□□□□ -1.67
PKP4Q99569 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 RNA5SP103-201ENST00000459503 118 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PKP4Q99569 RPL21P47-201ENST00000483696 477 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 AC020890.1-201ENST00000491837 504 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 AC010374.1-201ENST00000503762 1237 ntBASIC4.62□□□□□ -1.67
PKP4Q99569 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.62□□□□□ -1.67
PKP4Q99569 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms