Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC124856.1-201ENST00000600819 896 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC021171.1-201ENST00000603137 706 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC020910.3-201ENST00000603701 874 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC099676.1-201ENST00000608886 657 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC090510.2-201ENST00000617465 629 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC022079.1-201ENST00000621546 602 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC104446.1-201ENST00000613728 1321 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC131971.1-201ENST00000332881 1482 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AP001642.1-201ENST00000624727 2117 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 NACA3P-201ENST00000359690 648 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 SNORA40.2-201ENST00000390847 128 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC114755.2-201ENST00000413520 361 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 ELOCP9-201ENST00000418624 239 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 OR2AM1P-201ENST00000422137 422 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL451139.1-201ENST00000434718 346 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 TPTE2P6-202ENST00000445572 1007 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 RHEBP2-201ENST00000450289 600 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC233982.1-201ENST00000451247 436 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 BX248409.1-201ENST00000455497 255 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 RN7SL558P-201ENST00000497468 299 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL035404.1-201ENST00000497982 568 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 SNORA3.4-201ENST00000515969 96 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 RNU6-709P-201ENST00000517257 104 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC023632.1-201ENST00000518463 375 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 OR5AZ1P-201ENST00000527448 943 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL049839.1-201ENST00000556151 657 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC090312.2-201ENST00000582687 378 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC006272.2-201ENST00000594725 163 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL121932.1-201ENST00000605542 214 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 TUSC7.1-201ENST00000610969 165 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL592148.2-201ENST00000612210 372 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL353726.1-201ENST00000614041 1000 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC015914.2-201ENST00000618167 288 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL158163.2-201ENST00000619110 700 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 AC087821.2-201ENST00000637086 450 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 CASC19-206ENST00000641028 1430 ntBASIC4.86□□□□□ -1.63
PKP3Q9Y446 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.86□□□□□ -1.63
PKP3Q9Y446 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKP3Q9Y446 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKP3Q9Y446 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKP3Q9Y446 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 SNORA51.8-201ENST00000384234 132 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 ERHP2-201ENST00000402323 299 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 AL590084.1-201ENST00000407885 387 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 AL008987.1-201ENST00000415528 237 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 COX6B1P1-201ENST00000415962 213 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 GAPDHP49-201ENST00000421421 961 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 OR2AH1P-201ENST00000425717 928 ntBASIC4.85□□□□□ -1.63
PKP3Q9Y446 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.85□□□□□ -1.63
PKP3Q9Y446 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms