Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 POM121L13P-201ENST00000422362 380 ntBASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 AP003097.1-201ENST00000530657 1135 ntBASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 AL121829.2-201ENST00000620908 328 ntBASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 AC125437.2-201ENST00000625180 2167 ntBASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DRB4X5D2U9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 AC004408.2-201ENST00000623613 2777 ntBASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DRB4X5D2U9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 AC026366.1-201ENST00000488803 879 ntBASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms