Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS1Q9Y6A9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 AC103702.1-201ENST00000548801 2630 ntBASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 AC068587.6-202ENST00000641839 5619 ntBASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 AC008764.6-201ENST00000595909 2069 ntBASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 AC006333.2-201ENST00000607957 2099 ntBASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SPCS1Q9Y6A9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 AL691432.2-201ENST00000607222 2038 ntBASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SPCS1Q9Y6A9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 TSPY26P-202ENST00000565928 3884 ntBASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 AC003102.1-202ENST00000563394 1796 ntBASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SPCS1Q9Y6A9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms