Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC2Q9Y5Z7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 ZNF444P1-201ENST00000559497 298 ntBASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 AC007375.3-201ENST00000600936 2314 ntBASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC2Q9Y5Z7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 NEK4P2-201ENST00000580004 1012 ntBASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC2Q9Y5Z7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 HYMAI.1-201ENST00000620949 238 ntBASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC2Q9Y5Z7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 KRT8P11-201ENST00000409686 1436 ntBASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 STARP1-201ENST00000397973 869 ntBASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 GCSHP2-201ENST00000560971 527 ntBASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC2Q9Y5Z7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
HCFC2Q9Y5Z7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
HCFC2Q9Y5Z7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
HCFC2Q9Y5Z7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.83
HCFC2Q9Y5Z7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HCFC2Q9Y5Z7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.27■□□□□ 0.83
HCFC2Q9Y5Z7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC2Q9Y5Z7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HCFC2Q9Y5Z7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
HCFC2Q9Y5Z7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC2Q9Y5Z7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HCFC2Q9Y5Z7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms