Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.63■□□□□ 0.73
RAI2Q9Y5P3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI2Q9Y5P3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
RAI2Q9Y5P3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI2Q9Y5P3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAI2Q9Y5P3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 TSPY15P-201ENST00000457163 923 ntBASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 AP002982.1-201ENST00000492365 877 ntBASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.62■□□□□ 0.73
RAI2Q9Y5P3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 AL353807.1-201ENST00000427475 662 ntBASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 AF186192.3-201ENST00000583427 947 ntBASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 HLA-A-209ENST00000638375 975 ntBASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI2Q9Y5P3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AL135905.2-201ENST00000584934 1404 ntBASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 KRT17P2-201ENST00000300992 1314 ntBASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AC087499.1-201ENST00000418141 1075 ntBASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI2Q9Y5P3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 RPS2P55-201ENST00000397318 883 ntBASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 NIFKP9-201ENST00000419265 221 ntBASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms