Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 TFP1-202ENST00000475455 1573 ntBASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 AC097488.1-201ENST00000507834 756 ntBASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 KRT16P6-202ENST00000425692 1426 ntBASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA9Q9Y5G4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 AC011506.1-201ENST00000474329 610 ntBASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 AC020907.5-201ENST00000624372 1936 ntBASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA9Q9Y5G4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 CRYGFP-201ENST00000418459 633 ntBASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 BX664615.1-201ENST00000443558 458 ntBASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 ECEL1P2-202ENST00000465689 757 ntBASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 LINC01238-205ENST00000567549 1107 ntBASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 AC006011.2-201ENST00000621313 1158 ntBASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA9Q9Y5G4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA9Q9Y5G4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms