Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 MIR638-201ENST00000385237 100 ntBASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AL589743.5-201ENST00000616611 1050 ntBASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF815P-204ENST00000434898 1737 ntBASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 NTF6G-201ENST00000591094 616 ntBASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 AC069236.1-201ENST00000604339 616 ntBASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D4Q9Y2X8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 AL355472.2-201ENST00000422958 438 ntBASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 CNN2P6-201ENST00000439038 900 ntBASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 AL031598.1-201ENST00000561511 1773 ntBASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms