Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 AC141586.3-201ENST00000562166 1838 ntBASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 AC005181.1-201ENST00000604782 1256 ntBASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 BCL2-203ENST00000589955 5011 ntBASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 TEX21P-204ENST00000641479 1693 ntBASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPS28Q9Y2Q9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 TFP1-202ENST00000475455 1573 ntBASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
MRPS28Q9Y2Q9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 CROCCP3-202ENST00000420820 1947 ntBASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AL390719.1-204ENST00000412397 1219 ntBASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 AL049812.1-201ENST00000432563 2267 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms