Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRCH1Q9Y2L9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
LRCH1Q9Y2L9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
LRCH1Q9Y2L9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRCH1Q9Y2L9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
LRCH1Q9Y2L9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
LRCH1Q9Y2L9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 AC010525.1-201ENST00000585559 441 ntBASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 FP475955.4-201ENST00000623131 1990 ntBASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRCH1Q9Y2L9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 AC008764.6-201ENST00000595909 2069 ntBASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.37■□□□□ 0.53
LRCH1Q9Y2L9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 IRS3P-201ENST00000223076 1006 ntBASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 ESPNP-201ENST00000270691 2015 ntBASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms