Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 AP006587.1-201ENST00000534129 1502 ntBASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 AC018553.1-201ENST00000616682 1458 ntBASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 DUSP5P1-201ENST00000441325 1139 ntBASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.94□□□□□ -0.02
NOTCH3Q9UM47 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 RNF152P1-201ENST00000397754 604 ntBASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 LIN28AP1-201ENST00000429574 405 ntBASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 YBX1P2-201ENST00000489612 999 ntBASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC14.93□□□□□ -0.02
NOTCH3Q9UM47 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 CRYGFP-201ENST00000418459 633 ntBASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 AL031133.1-201ENST00000406807 723 ntBASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 AC006011.2-201ENST00000621313 1158 ntBASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NOTCH3Q9UM47 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 CLDN5-201ENST00000403084 2357 ntBASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NOTCH3Q9UM47 HMGA1P5-201ENST00000412453 271 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms