Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
PRDM4Q9UKN5 AC006333.2-201ENST00000607957 2099 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 OR2I1P-207ENST00000453522 948 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 pRNA.6-201ENST00000610482 90 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 pRNA.5-201ENST00000612139 90 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 pRNA.11-201ENST00000618423 90 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 pRNA.13-201ENST00000619112 90 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 AL031602.1-201ENST00000633169 911 ntBASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM4Q9UKN5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 LINC02228-204ENST00000642115 2962 ntBASIC19.98■□□□□ 0.79
PRDM4Q9UKN5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 PCDHB17P-201ENST00000539533 2393 ntBASIC19.97■□□□□ 0.79
PRDM4Q9UKN5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRDM4Q9UKN5 SYT6-210ENST00000641643 1587 ntBASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms